Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Serine acetyltransferase | SAMN05421757_10292 | Not Available | - | 1013274 - 1014089 | 28828.8 |
| Ribonuclease iii | SAMN05421757_10293 | Not Available | - | 1014188 - 1014898 | 24464.1 |
| Tail protein | SAMN05421757_10294 | Not Available | - | 1014891 - 1018817 | 141990.0 |
| Phage cell wall peptidase | SAMN05421757_10295 | Not Available | - | 1018817 - 1019296 | 17298.7 |
| Minor tail protein | SAMN05421757_10296 | Not Available | - | 1019289 - 1020188 | 31938.3 |
| Tail protein | SAMN05421757_10297 | Not Available | - | 1020188 - 1020820 | 22872.8 |
| Tail tape measure protein | SAMN05421757_10298 | Not Available | - | 1020842 - 1021504 | 22269.7 |
| phage conserved hypothetical protein | SAMN05421757_10299 | Not Available | - | 1021494 - 1021691 | 7076.63 |
| phage tail tube protein, gta-gp10 | SAMN05421757_102100 | Not Available | - | 1021696 - 1022019 | 10896.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | SAMN05421757_102101 | Not Available | - | 1022023 - 1022436 | 14397.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
