Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 677658 - 677705 | Not Available |
| Integrase | SAMN04488094_101632 | Not Available | - | 677774 - 678802 | 39341.6 |
| hypothetical protein | SAMN04488094_101633 | Not Available | - | 678799 - 678987 | 6685.91 |
| hypothetical protein | SAMN04488094_101634 | Not Available | - | 679008 - 679481 | 17384.5 |
| Hypothetical protein | SAMN04488094_101635 | Not Available | - | 679558 - 679743 | 6784.08 |
| hypothetical protein | SAMN04488094_101636 | Not Available | - | 679796 - 680227 | 15838.8 |
| hypothetical protein | SAMN04488094_101637 | Not Available | - | 680224 - 680478 | 9309.9 |
| arc-like dna binding domain-containing protein | SAMN04488094_101638 | Not Available | - | 680497 - 680652 | 5914.04 |
| Arc domain-containing protein | SAMN04488094_101639 | Not Available | + | 680742 - 681128 | 14478.4 |
| Hypothetical protein | SAMN04488094_101640 | Not Available | - | 681232 - 681570 | 12363.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
