Flavobacterium defluvii strain DSM 17963

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium defluvii strain DSM 17963 is a Gram-negative, non-spore-forming rod-shaped bacterium that thrives optimally at a temperature of 29.0°C. This strain belongs to the genus Flavobacterium, which is characterized by its diverse metabolic capabilities and ecological roles in various environments. As a member of the Flavobacteriaceae family, F. defluvii is likely to be involved in the degradation of organic materials, contributing to nutrient cycling within its environment. The Gram-negative nature of this bacterium indicates the presence of a thin peptidoglycan layer and an outer membrane, which can influence its interactions with other microorganisms and its resilience to certain environmental stresses. Given its optimal growth temperature of 29.0°C, F. defluvii may be well-suited for environments such as freshwater ecosystems, where temperature fluctuations can occur but generally remain within moderate ranges. This adaptability could enable the strain to play a significant role in the microbiota of aquatic habitats, where it may participate in the breakdown of complex organic compounds. Understanding the metabolic pathways and ecological functions of Flavobacterium defluvii strain DSM 17963 could provide insights into its contributions to biogeochemical cycles, particularly in freshwater environments, where microbial communities are essential for maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium defluvii
Strainstrain DSM 17963

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium defluvii strain DSM 17963
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium defluvii strain DSM 17963


Gene Summary

Adenine Count

1625039 bp

Thymine Count

1602877 bp

Guanine Count

825711 bp

Cytosine Count

817191 bp

Genome Length

4871623 bp

Protein-coding Genes

4186 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail sheath proteinSAMN05443663_10114Not Available+13451 - 1555076522.8
Putative tail tube protein 2SAMN05443663_10115Not Available+15580 - 1600816343.3
Putative tail tube protein 2SAMN05443663_10116Not Available+16011 - 1645717096.3
hypothetical proteinSAMN05443663_10117Not Available+16460 - 166185936.24
Conserved uncharacterised proteinSAMN05443663_10118Not Available+16621 - 1730425971.8
Phage baseplate assembly protein vSAMN05443663_10119Not Available+17304 - 1904963694.3
zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretionSAMN05443663_10120Not Available+19053 - 193439040.23
Baseplate wedge subunitSAMN05443663_10121Not Available+19346 - 1975615581.9
5s ribosomal rna . bacterial tsuNot AvailableNot Available+1 - 8218.01
16s ribosomal rna . bacterial ssuNot AvailableNot Available+353 - 187018.01

Displaying genes 1 – 10 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.