Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN04488094_102100 | Not Available | + | 961405 - 961677 | 10044.8 |
| protein of unknown function | SAMN04488094_102101 | Not Available | + | 961773 - 962360 | 20385.3 |
| Hypothetical protein | SAMN04488094_102102 | Not Available | - | 962415 - 962639 | 8006.09 |
| hypothetical protein | SAMN04488094_102103 | Not Available | - | 962636 - 962920 | 10405.4 |
| hypothetical protein | SAMN04488094_102104 | Not Available | + | 962958 - 963656 | 24814.3 |
| Transferase | SAMN04488094_102105 | Not Available | - | 963676 - 965004 | 48775.2 |
| Hnh endonuclease | SAMN04488094_102106 | Not Available | - | 964979 - 965743 | 28278.2 |
| hypothetical protein | SAMN04488094_102107 | Not Available | - | 966195 - 966620 | 16632.0 |
| hypothetical protein | SAMN04488094_102108 | Not Available | - | 966613 - 966813 | 7632.86 |
| Crossover junction endodeoxyribonuclease ruvc | SAMN04488094_102109 | Not Available | - | 966810 - 967331 | 18444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
