Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10290 | Not Available | - | 952719 - 953351 | 22601.8 |
| hypothetical protein | SAMN04488094_10291 | Not Available | - | 953357 - 953671 | 11516.6 |
| hypothetical protein | SAMN04488094_10292 | Not Available | + | 953756 - 954532 | 29227.3 |
| Major capsid | SAMN04488094_10293 | Not Available | - | 954537 - 955550 | 37726.5 |
| Head decoration protein d | SAMN04488094_10294 | Not Available | - | 955633 - 955998 | 12363.7 |
| Bacteriophage clp protease involved in capsid processing | SAMN04488094_10295 | Not Available | - | 956003 - 957019 | 35275.2 |
| Portal protein | SAMN04488094_10296 | Not Available | - | 957024 - 958544 | 55335.9 |
| hypothetical protein | SAMN04488094_10297 | Not Available | - | 958548 - 958763 | 7769.25 |
| Large terminase subunit | SAMN04488094_10298 | Not Available | - | 958767 - 960761 | 74257.7 |
| hypothetical protein | SAMN04488094_10299 | Not Available | - | 960709 - 961293 | 20789.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
