Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | SAMN04488094_101699 | Not Available | - | 741026 - 741436 | 14093.0 |
| Head-tail adaptor protein | SAMN04488094_101700 | Not Available | - | 741433 - 741780 | 12684.1 |
| Dna packaging/head-tail-connector | SAMN04488094_101701 | Not Available | - | 741777 - 742373 | 21944.6 |
| Phage major capsid protein | SAMN04488094_101702 | Not Available | - | 742542 - 743717 | 41501.9 |
| Putative prohead protease | SAMN04488094_101703 | Not Available | - | 743761 - 744321 | 20179.2 |
| Portal protein | SAMN04488094_101704 | Not Available | - | 744352 - 745536 | 42560.7 |
| Large packaging protein | SAMN04488094_101705 | Not Available | - | 745851 - 747176 | 48010.0 |
| Peptidase m15 | SAMN04488094_10277 | Not Available | - | 939681 - 940355 | 24620.6 |
| Hypothetical protein | SAMN04488094_10278 | Not Available | - | 940430 - 940720 | 10497.0 |
| Ribonuclease iii | SAMN04488094_10279 | Not Available | - | 940734 - 941810 | 38270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
