Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN04488094_1463 | Not Available | + | 4966765 - 4968336 | 58323.5 |
| iclr helix-turn-helix domain-containing protein | SAMN04488094_1471 | Not Available | + | 4968593 - 4968871 | 10194.3 |
| transcriptional regulator, laci family | SAMN04488094_1472 | Not Available | + | 4969045 - 4970073 | 37428.7 |
| hypothetical protein | SAMN04488094_1481 | Not Available | + | 4970510 - 4971391 | 32575.6 |
| toxin pare1/3/4 | SAMN04488094_1482 | Not Available | - | 4971589 - 4971879 | 10740.0 |
| antitoxin pard1/3/4 | SAMN04488094_1483 | Not Available | - | 4971883 - 4972146 | 9643.51 |
| protein of unknown function | SAMN04488094_1491 | Not Available | - | 4972686 - 4973876 | 45442.5 |
| transposase (or an inactivated derivative) | SAMN04488094_1501 | Not Available | - | 4974074 - 4975270 | 44643.5 |
| n-acylmannosamine kinase | SAMN04488094_1511 | Not Available | - | 4975416 - 4976151 | 24650.5 |
| putative n-acetylmannosamine-6-phosphate epimerase | SAMN04488094_1512 | Not Available | - | 4976141 - 4976641 | 17471.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
