Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase, is5 family | SAMN04488094_1379 | Not Available | - | 4935120 - 4935467 | 13125.8 |
| hypothetical protein | SAMN04488094_1381 | Not Available | - | 4935573 - 4936517 | 34627.1 |
| hypothetical protein | SAMN04488094_1382 | Not Available | - | 4936699 - 4936848 | 5708.1 |
| protein of unknown function | SAMN04488094_1383 | Not Available | + | 4936933 - 4937520 | 21292.8 |
| segregation and condensation protein b | SAMN04488094_1384 | Not Available | + | 4937524 - 4938123 | 22068.2 |
| hypothetical protein | SAMN04488094_1385 | Not Available | + | 4938470 - 4938622 | 5555.8 |
| integrase core domain-containing protein | SAMN04488094_1386 | Not Available | - | 4938850 - 4939884 | 38941.9 |
| transposase | SAMN04488094_1387 | Not Available | - | 4940018 - 4940326 | 12178.1 |
| hypothetical protein | SAMN04488094_1391 | Not Available | - | 4940510 - 4940677 | 5676.78 |
| type iv secretion system protein virb4 | SAMN04488094_1392 | Not Available | - | 4940674 - 4943037 | 88143.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
