Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | SAMN04488094_1365 | Not Available | + | 4926500 - 4927990 | 54746.4 |
| dde superfamily endonuclease | SAMN04488094_1366 | Not Available | - | 4928030 - 4928525 | 18098.4 |
| putative n-acetylmannosamine-6-phosphate epimerase | SAMN04488094_1371 | Not Available | - | 4928526 - 4928797 | 9542.8 |
| trap transporter, dctm subunit | SAMN04488094_1372 | Not Available | - | 4928794 - 4930068 | 45097.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_1373 | Not Available | - | 4930065 - 4930550 | 18361.0 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04488094_1374 | Not Available | - | 4930607 - 4931566 | 34474.9 |
| dna-binding transcriptional regulator, fadr family | SAMN04488094_1375 | Not Available | - | 4931581 - 4932309 | 27108.5 |
| n-acetylneuraminate lyase | SAMN04488094_1376 | Not Available | + | 4932417 - 4933307 | 31750.3 |
| n-acetylneuraminate epimerase | SAMN04488094_1377 | Not Available | + | 4933377 - 4934528 | 40376.2 |
| transposase | SAMN04488094_1378 | Not Available | - | 4934710 - 4935099 | 14822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
