Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Acetyltransferase | SAMN04488094_101689 | Not Available | - | 731808 - 732635 | 29477.5 |
| Ribonuclease iii | SAMN04488094_101690 | Not Available | - | 732742 - 733452 | 24929.4 |
| Tail protein | SAMN04488094_101691 | Not Available | - | 733445 - 737371 | 141939.0 |
| Phage cell wall peptidase | SAMN04488094_101692 | Not Available | - | 737371 - 737850 | 17522.9 |
| Minor tail protein | SAMN04488094_101693 | Not Available | - | 737843 - 738739 | 32050.6 |
| Tail protein | SAMN04488094_101694 | Not Available | - | 738739 - 739371 | 23041.2 |
| Putative tail tape measure protein | SAMN04488094_101695 | Not Available | - | 739393 - 740055 | 22332.8 |
| phage conserved hypothetical protein | SAMN04488094_101696 | Not Available | - | 740036 - 740278 | 8642.53 |
| phage tail tube protein, gta-gp10 | SAMN04488094_101697 | Not Available | - | 740247 - 740570 | 10847.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | SAMN04488094_101698 | Not Available | - | 740574 - 740987 | 14406.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
