Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Phage major capsid protein | SAMN04488094_101651 | Not Available | - | 688775 - 689926 | 41712.4 |
| Putative prohead protease | SAMN04488094_101652 | Not Available | - | 689929 - 690429 | 17775.5 |
| Tail fiber protein | SAMN04488094_101653 | Not Available | - | 690429 - 690686 | 8875.59 |
| Hypothetical protein | SAMN04488094_101654 | Not Available | - | 690686 - 691072 | 14017.4 |
| Putative portal protein | SAMN04488094_101655 | Not Available | - | 691059 - 692249 | 43676.6 |
| hypothetical protein | SAMN04488094_101656 | Not Available | - | 692522 - 692809 | 10800.2 |
| hypothetical protein | SAMN04488094_101657 | Not Available | - | 692806 - 693033 | 8532.23 |
| primase c terminal 1 (prict-1) | SAMN04488094_101658 | Not Available | - | 693085 - 694122 | 38300.3 |
| Hypothetical protein | SAMN04488094_101659 | Not Available | - | 694122 - 695054 | 34861.1 |
| Attr | Not Available | Not Available | + | 695283 - 695330 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
