Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Phage tail-related protein | SAMN04488094_101641 | Not Available | - | 681567 - 683882 | 80797.3 |
| Portal protein | SAMN04488094_101642 | Not Available | - | 683892 - 685499 | 60379.3 |
| Gp1, phage terminase, small subunit, p27 family | SAMN04488094_101643 | Not Available | - | 685477 - 685866 | 14426.2 |
| Gp9 | SAMN04488094_101644 | Not Available | - | 685866 - 686186 | 11847.9 |
| Hypothetical protein | SAMN04488094_101645 | Not Available | - | 686183 - 686599 | 14739.8 |
| Head/tail component | SAMN04488094_101646 | Not Available | - | 686596 - 687006 | 14649.5 |
| phage gp6-like head-tail connector protein | SAMN04488094_101647 | Not Available | - | 687006 - 687317 | 11402.3 |
| hypothetical protein | SAMN04488094_101648 | Not Available | - | 687320 - 687763 | 16023.0 |
| Tail collar domain | SAMN04488094_101649 | Not Available | - | 687763 - 688248 | 17045.7 |
| hypothetical protein | SAMN04488094_101650 | Not Available | - | 688611 - 688778 | 5999.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
