Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | SAMN05216354_0884 | Not Available | - | 865160 - 867784 | 98503.7 |
| muramoyltetrapeptide carboxypeptidase | SAMN05216354_0885 | Not Available | + | 867894 - 868859 | 35491.1 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN05216354_0886 | Not Available | + | 868837 - 869472 | 24440.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216354_0887 | Not Available | + | 869566 - 870051 | 19284.3 |
| hypothetical protein | SAMN05216354_0888 | Not Available | + | 870065 - 870643 | 22484.1 |
| leucyl-trna synthetase | SAMN05216354_0889 | Not Available | + | 871010 - 873826 | 108163.0 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05216354_0890 | Not Available | + | 873827 - 874807 | 36704.7 |
| xtp/ditp diphosphohydrolase | SAMN05216354_0891 | Not Available | + | 874782 - 875393 | 22575.8 |
| two component regulator propeller | SAMN05216354_0892 | Not Available | + | 875421 - 877352 | 72042.9 |
| quinolinate synthetase | SAMN05216354_0893 | Not Available | - | 877393 - 878337 | 34743.2 |
Pathways
401 pathways
