Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 1 - 1053 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 2 - 1343 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 416 - 532 | 18.01 |
| hypothetical protein | SAMN05421504_1013 | Not Available | + | 573 - 1466 | 31708.6 |
| hypothetical protein | SAMN05421504_1014 | Not Available | + | 1585 - 3450 | 69290.9 |
| haloacid dehalogenase superfamily class (subfamily) iia | SAMN05421504_1015 | Not Available | + | 3443 - 4423 | 33496.9 |
| hypothetical protein | SAMN05421504_1016 | Not Available | + | 4466 - 4663 | 7048.09 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN05421504_1017 | Not Available | + | 4668 - 5483 | 28720.6 |
| nad+ kinase | SAMN05421504_1018 | Not Available | + | 5480 - 6403 | 33253.6 |
| dna repair protein recn (recombination protein n) | SAMN05421504_1019 | Not Available | + | 6500 - 8329 | 64394.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
