Marinomonas gallaica strain CECT 5115

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas gallaica strain CECT 5115 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and exhibits aerobic metabolic characteristics. This strain is part of the Marinomonas genus, which is known for its adaptation to marine environments. The Gram-negative nature of M. gallaica suggests a complex cell wall structure, typically characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its survival in diverse aquatic habitats. As an aerobic organism, M. gallaica strain CECT 5115 relies on oxygen for its metabolic processes, indicating a potential role in the cycling of organic materials in oxygen-rich marine environments. Its optimal growth temperature of 25.0°C aligns with temperate marine conditions, suggesting that this strain may be well-integrated into the microbial communities found in coastal and oceanic waters. The presence of this specific strain in marine ecosystems could potentially indicate its involvement in biogeochemical processes, such as nutrient cycling and organic matter degradation. Further exploration of its metabolic pathways and interactions with other marine microorganisms may reveal insights into its ecological role and contributions to the dynamics of marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas gallaica
Strainstrain CECT 5115

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas gallaica strain CECT 5115


Gene Summary

Adenine Count

1048965 bp

Thymine Count

1045939 bp

Guanine Count

862831 bp

Cytosine Count

868816 bp

Genome Length

3828797 bp

Protein-coding Genes

3515 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Dna packaging proteinMGA5115_03322P69592-3513928 - 35140444227.24
External scaffolding proteinMGA5115_03323P69486-3514044 - 351450216938.3
CMGA5115_03324P69172-3514499 - 351475910081.0
Dna replication initiation protein gpaMGA5115_03325P03631-3514756 - 351629758721.8
Minor spike proteinMGA5115_03326P03646-3516361 - 351734734449.3
Major spike proteinMGA5115_03327P03643-3517356 - 351788319048.7
Capsid proteinMGA5115_03328P03641-3517994 - 351924747397.1
5s ribosomal rnaNot AvailableNot Available+2 - 108Not Available
5s ribosomal rnaNot AvailableNot Available+53 - 162Not Available
5s ribosomal rnaNot AvailableNot Available+251 - 360Not Available

Displaying genes 1 – 10 of 3618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

237 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 237 metabolites