MAG TPA_asm: Pseudomonas sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MAG TPA_asm is a Gram-negative, rod-shaped bacterium that thrives in diverse environments, including dental plaque, fresh water, marine ecosystems, and various terrestrial habitats such as the rhizosphere of common reeds, soils, and the phyllosphere. This microbe exhibits an aerobic metabolism, indicating its reliance on oxygen for energy production. The adaptability of Pseudomonas sp. MAG TPA_asm to both aquatic and terrestrial habitats underscores its ecological versatility. In dental plaque, it may play a role in oral microbial communities, while its presence in soils and on plant surfaces suggests potential interactions with plant rhizospheres, possibly influencing nutrient cycling or plant health. Additionally, the bacterium’s occurrence in nasal discharge points to its involvement in the microbiota of mammals, which may have implications for understanding microbial dynamics in various body sites. Overall, the wide distribution of Pseudomonas sp. MAG TPA_asm across different environments highlights its ecological importance and suggests that it may contribute to various biogeochemical processes, particularly in nutrient-rich habitats. This versatility positions it as a significant player in both microbial interactions and ecosystem functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of MAG TPA_asm: Pseudomonas sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature40
Temperature rangeNot Available
Habitatdental plaque; Fresh water; Marine; nasal discharge; phyllosphere; rhizosphere; rhizosphere of common reeds; soils; tongue surface
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Pseudomonas sp.


Gene Summary

Adenine Count

1020840 bp

Thymine Count

1018640 bp

Guanine Count

1501800 bp

Cytosine Count

1501231 bp

Genome Length

5413818 bp

Protein-coding Genes

5499 genes

Non-Coding Genes

22 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
electron transfer flavoprotein subunit alphaDIW52_00005Not Available-1 - 75225172.1
electron transporter rnfbDIW52_00010Not Available-755 - 150426329.2
electron transfer flavoprotein-ubiquinone oxidoreductaseDIW52_00015Not Available+2052 - 354254511.2
Ncrna_class:otherNot AvailableNot Available+3066 - 3244Not Available
Ncrna_class:rnase_p_rnaNot AvailableNot Available+3293 - 3646Not Available
tetr/acrr family transcriptional regulatorDIW52_00020Not Available+3617 - 426423340.4
transcriptional regulatorDIW52_00025Not Available-4354 - 466211354.7
metal-chelation protein chadDIW52_00030Not Available-5212 - 599429584.5
arsenate reductase arscDIW52_00040Not Available+6406 - 681915598.3
cupinDIW52_00045Not Available+6996 - 734012510.9

Displaying genes 1 – 10 of 15100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites