Bacteroides caccae strain 2789STDY5834946

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caccae strain 2789STDY5834946 is a Gram-negative, anaerobic bacterium belonging to the genus Bacteroides. This microbe is characterized by its inability to thrive in the presence of oxygen, which is typical for many members of the Bacteroides genus that inhabit anaerobic environments. Bacteroides caccae is known to be part of the human gut microbiota, contributing to the complex ecosystem of microorganisms that play crucial roles in digestion and metabolic processes. As a Gram-negative organism, B. caccae strain 2789STDY5834946 possesses a thin peptidoglycan layer surrounded by an outer membrane, which includes lipopolysaccharides. This structural configuration is significant as it can influence the bacterium's interactions with the host's immune system and contribute to its survival in the gastrointestinal tract. The anaerobic nature of B. caccae suggests it is well-adapted to environments where oxygen is absent, such as the colon, where it may participate in the fermentation of complex carbohydrates. This fermentation process can produce short-chain fatty acids, which are beneficial for the host's health by serving as an energy source for colonocytes and playing a role in maintaining gut health. Overall, the traits of Bacteroides caccae strain 2789STDY5834946 highlight its potential importance in gut microbiota dynamics, emphasizing its role in nutrient metabolism and the maintenance of host homeostasis in anaerobic conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caccae
Strainstrain 2789STDY5834946

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; intestinal
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Bacteroides caccae strain 2789STDY5834946


Gene Summary

Adenine Count

1494792 bp

Thymine Count

1539156 bp

Guanine Count

1153861 bp

Cytosine Count

1094960 bp

Genome Length

5291863 bp

Protein-coding Genes

4470 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Phage transposaseERS852558_00976Not Available+1219792 - 122070634209.9
Hypothetical proteinERS852558_00977Not Available+1220703 - 122138026147.9
uncharacterised proteinERS852558_00978Not Available+1221349 - 122178016416.9
uncharacterised proteinERS852558_00979Not Available+1221767 - 12219918741.46
protein of uncharacterised function (duf3164)ERS852558_00980Not Available+1222015 - 122266225620.4
Putative phage head tail adapterERS852558_00981Not Available+1222659 - 122304514651.5
uncharacterised proteinERS852558_00982Not Available+1223042 - 122330510514.8
uncharacterised proteinERS852558_00983Not Available+1223313 - 12235168011.47
Hypothetical proteinERS852558_00984Not Available+1223693 - 122414217194.3
Hypothetical proteinERS852558_00985Not Available+1224180 - 122444910625.7

Displaying genes 1 – 10 of 1657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites