Parabacteroides distasonis strain 2789STDY5608872

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides distasonis strain 2789STDY5608872 is a Gram-positive, nonsporulating rod-shaped bacterium characterized as an anaerobe, indicating its ecological niche within host-associated environments. This strain, belonging to the genus Parabacteroides, is notable for its adaptation to anaerobic conditions, where it thrives in the absence of oxygen, which is a common characteristic of many intestinal microbiota. As an inhabitant of host-associated habitats, P. distasonis plays a potential role in the complex microbial ecosystem of the gut, contributing to the maintenance of gut health and homeostasis. While specific interactions or contributions to host metabolism are not detailed here, members of the Parabacteroides genus are known to be involved in the fermentation of dietary fibers and the production of short-chain fatty acids, which are beneficial for host energy metabolism. The strain's nonsporulating nature suggests that it relies on robust survival strategies within its host environment rather than forming spores to withstand harsh conditions. This trait may reflect its evolutionary adaptations to a stable niche, where it can effectively proliferate and exert its biological functions. Overall, understanding the role of P. distasonis strain 2789STDY5608872 in the gut microbiome could provide insights into its implications for host health and potential applications in microbiome research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides distasonis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Parabacteroides distasonis strain 2789STDY5608872
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides distasonis strain 2789STDY5608872


Gene Summary

Adenine Count

1418239 bp

Thymine Count

1382379 bp

Guanine Count

1119846 bp

Cytosine Count

1174227 bp

Genome Length

5099398 bp

Protein-coding Genes

4263 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3103167 - 3103178Not Available
Putative site-specific recombinaseERS852429_02666Not Available-3103360 - 310395623875.6
uncharacterised proteinERS852429_02667Not Available-3103966 - 31040644008.18
Dna ligaseERS852429_02668Q5UPZ0-3104103 - 310605572608.8
uncharacterised proteinERS852429_02669Not Available-3106042 - 310662322374.6
Phi92_gp043ERS852429_02670O33481-3106620 - 310752534259.7
uncharacterised proteinERS852429_02671Not Available-3107522 - 31077649421.45
uncharacterised proteinERS852429_02672Not Available-3107761 - 310803610891.1
Kila proteinERS852429_02673Not Available-3108093 - 310934047894.2
uncharacterized phage-encoded proteinERS852429_02674Not Available-3109324 - 311010030446.3

Displaying genes 1 – 10 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

195 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 195 metabolites