Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00001 | Not Available | + | 598 - 873 | 10458.7 |
| putative transposase | PDPJ_1_00002 | Not Available | - | 1199 - 1837 | 25027.6 |
| putative transposase | PDPJ_1_00003 | Not Available | - | 1798 - 2292 | 19008.4 |
| hypothetical protein | PDPJ_1_00004 | Not Available | - | 2415 - 2783 | 14123.8 |
| hypothetical protein | PDPJ_1_00005 | Not Available | - | 2903 - 3124 | 8291.33 |
| hypothetical protein | PDPJ_1_00006 | Not Available | - | 3173 - 3448 | 10458.7 |
| hypothetical protein | PDPJ_1_00007 | Not Available | + | 3584 - 3880 | 11342.4 |
| putative transposase | PDPJ_1_00008 | Not Available | + | 4003 - 5097 | 42839.4 |
| putative mfs-type transporter yhjx | PDPJ_1_00009 | Not Available | + | 5261 - 6127 | 31741.9 |
| protease htpx | PDPJ_1_00010 | Not Available | - | 6291 - 7172 | 31938.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
