Bacteroides graminisolvens DSM 19988 = JCM 15093

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides graminisolvens DSM 19988 = JCM 15093 is a Gram-negative, non-spore-forming rod that thrives under anaerobic conditions, with an optimal growth temperature of approximately 32.0°C. This species belongs to the genus Bacteroides, which is well-known for its role in the degradation of complex polysaccharides in various environments, particularly in the gastrointestinal tracts of animals. As a member of the Bacteroidetes phylum, Bacteroides graminisolvens contributes to the microbial diversity and functionality of anaerobic ecosystems. Its ability to metabolize plant-derived carbohydrates may facilitate nutrient cycling and energy flow within its habitat, potentially influencing the overall health and stability of microbial communities. The non-spore-forming nature of this organism suggests that it relies on stable environmental conditions for survival and proliferation, which is consistent with its adaptations to specific ecological niches. The ecological significance of Bacteroides graminisolvens may extend to its interactions with other microbial species, particularly in the context of symbiotic relationships within the gut microbiome or other anaerobic environments. Understanding the metabolic capabilities and ecological roles of such organisms is crucial for elucidating their contributions to nutrient cycling and their potential applications in biotechnology and health-related fields.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides graminisolvens
StrainDSM 19988 = JCM 15093

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides graminisolvens DSM 19988 = JCM 15093


Gene Summary

Adenine Count

1088159 bp

Thymine Count

1065570 bp

Guanine Count

747829 bp

Cytosine Count

779146 bp

Genome Length

3680704 bp

Protein-coding Genes

3337 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Dna-binding proteinJCM15093_1698Not Available+1837053 - 183785630630.8
Capsid maturation proteaseJCM15093_1699Not Available+1837986 - 183925746059.8
Hypothetical proteinJCM15093_1700Not Available+1839363 - 184040639005.4
hypothetical proteinJCM15093_1701Not Available+1840476 - 184079911513.4
Structural proteinJCM15093_1702Not Available+1840803 - 184189440144.9
Structural proteinJCM15093_1703Not Available+1841906 - 18421458382.26
Tail tubeJCM15093_1704Not Available+1842154 - 184260916470.4
MethyltransferaseJCM15093_1705Not Available+1842779 - 184326118047.8
hypothetical proteinJCM15093_1706Not Available+1843315 - 184368613993.0
hypothetical proteinJCM15093_1707Not Available+1843967 - 18441858062.74

Displaying genes 1 – 10 of 3407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

542 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 542 metabolites