Porphyromonas gingivalis SJD12

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis SJD12 is a Gram-negative, rod-shaped bacterium that is nonsporulating and thrives in anaerobic conditions. This microbe is typically associated with host environments, indicating its adaptation to living within specific biological systems, particularly in the human oral cavity where it is known to be part of the subgingival microbiota. Its optimal growth temperature is 37.0°C, aligning with the physiological temperature of the human body, which further suggests its role in host-associated habitats. The anaerobic nature of P. gingivalis SJD12 highlights its dependence on low-oxygen environments, which is characteristic of many oral bacteria that inhabit periodontal pockets. As an anaerobe, it likely utilizes fermentation pathways to generate energy in the absence of oxygen, which may contribute to its ecological niche in the oral biofilm. Understanding the growth requirements and habitat preferences of Porphyromonas gingivalis SJD12 may provide insights into its interactions within the oral microbiome and its potential implications in oral health and disease. The ability of this bacterium to thrive in anaerobic conditions underscores the importance of oxygen depletion in the development and maintenance of polymicrobial communities in host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainSJD12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis SJD12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas gingivalis SJD12


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinSJDPG12_03025Not Available-314707 - 31512615731.1
sugar kinaseSJDPG12_03030Not Available-315198 - 31671254448.3
udp-n-acetylglucosamine acyltransferaseSJDPG12_03035Not Available-316717 - 31751128749.7
hydroxymyristoyl-acp dehydrataseSJDPG12_03040Not Available-317508 - 31889651751.9
udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferaseSJDPG12_03045Not Available-318875 - 31992437346.6
orotidine 5'-phosphate decarboxylaseSJDPG12_03050Not Available-320017 - 32084730656.8
peptide chain release factor 1SJDPG12_03055Not Available-320864 - 32194940372.2
phosphoribosylformylglycinamidine cyclo-ligaseSJDPG12_03060Not Available-321974 - 32314042552.9
n-acetylmuramoyl-l-alanine amidaseSJDPG12_03065Not Available-323169 - 32411036216.9
hypothetical proteinSJDPG12_03070Not Available-324173 - 3242683501.1

Displaying genes 281 – 290 of 2017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites