Porphyromonas gingivalis JCVI SC001

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis JCVI SC001 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in anaerobic environments, with an optimal growth temperature of 37.0°C. This microbe is primarily associated with host habitats, indicating its reliance on specific host interactions for survival and proliferation. As an anaerobe, P. gingivalis JCVI SC001 occupies environments where oxygen is limited, which often includes the oral cavity where it is commonly found. Its rod shape and anaerobic metabolic requirements suggest a specialized adaptation to the nutrient-rich yet oxygen-depleted niches within host organisms. While the specific pathogenicity or ecological roles of this strain are not detailed, its habitat association implies that it may play a role in the complex microbiota of the host, possibly influencing oral health and disease dynamics. Understanding the traits of P. gingivalis JCVI SC001 can provide insights into its biological significance, particularly in relation to its interactions within the microbial ecosystem of the host.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainJCVI SC001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis JCVI SC001
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas gingivalis JCVI SC001


Gene Summary

Adenine Count

620174 bp

Thymine Count

619560 bp

Guanine Count

578825 bp

Cytosine Count

579637 bp

Genome Length

2398196 bp

Protein-coding Genes

2354 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinA343_0217Not Available+1 - 1485341.34
5s ribosomal rnaNot AvailableNot Available+130 - 240Not Available
23s ribosomal rnaNot AvailableNot Available+387 - 3220Not Available
sporulation and cell division repeat proteinA343_0218Not Available+432 - 90217465.7
udp-n-acetylmuramate dehydrogenaseA343_0219Not Available+902 - 191838134.2
beta-lactamase family proteinA343_0220Not Available+1945 - 312644960.3
putative iron-sulfur cluster-binding proteinA343_0139Not Available+3270 - 408830624.4
16s ribosomal rnaNot AvailableNot Available+4054 - 5528Not Available
hypothetical proteinA343_0140Not Available+4060 - 41734235.17
hypothetical proteinA343_0141Not Available-4212 - 43254239.04

Displaying genes 1 – 10 of 4493 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites