Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vancoresmycina |
| Strain | DSM 44592 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272890 bp
Thymine Count
1275200 bp
Guanine Count
3241647 bp
Cytosine Count
3246236 bp
Genome Length
9036495 bp
Protein-coding Genes
8680 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | H480_00410 | Not Available | - | 75891 - 76718 | 28677.8 |
| trna delta(2)-isopentenylpyrophosphate transferase | H480_00415 | Not Available | - | 76729 - 77640 | 32641.8 |
| hypothetical protein | H480_00420 | Not Available | + | 77857 - 79170 | 48489.2 |
| hypothetical protein | H480_00425 | Not Available | + | 79331 - 79768 | 15021.3 |
| transmembrane protein | H480_00430 | Not Available | - | 79788 - 80261 | 16478.0 |
| (dimethylallyl)adenosine trna methylthiotransferase | H480_00435 | Not Available | - | 80258 - 81751 | 54180.4 |
| hypothetical protein | H480_00440 | Not Available | - | 81809 - 82393 | 21267.8 |
| putative chromosome partition protein | H480_00445 | Not Available | - | 82423 - 82845 | 14978.0 |
| endoglycosylceramidase | H480_00450 | Not Available | - | 82958 - 84709 | 63146.8 |
| beta-xylosidase | H480_00455 | Not Available | - | 84789 - 86207 | 50309.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.