Rhodopirellula baltica SH28 cSH280182

ovoidaerobic

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Pirellulales

Family

Pirellulaceae

Genus

Rhodopirellula

Description

Rhodopirellula baltica SH28 cSH280182 is a Gram-negative, ovoid-shaped bacterium that exhibits aerobic growth and is non-spore-forming. This marine microorganism thrives optimally at a temperature of 29.0°C, indicating a preference for moderately warm aquatic environments. The Gram-negative characteristic suggests that it possesses a thin peptidoglycan layer and an outer membrane, which can influence its interactions with the surrounding environment, including nutrient uptake and susceptibility to antibiotics. As an aerobic organism, R. baltica relies on oxygen for its metabolic processes, which is typical for many marine bacteria that inhabit well-oxygenated waters. The absence of sporulation indicates that this strain does not produce spores as a survival mechanism under adverse conditions, which may reflect its ecological niche where stable environmental conditions are more prevalent. Rhodopirellula baltica has been studied for its potential role in biogeochemical cycles within marine ecosystems, particularly in the degradation of organic matter. Its adaptation to aerobic conditions and specific temperature preference may provide insights into the microbial community dynamics in coastal environments, where temperature fluctuations and oxygen availability are critical factors. Understanding the traits of R. baltica can enhance our knowledge of microbial diversity and function in marine habitats, highlighting its potential contributions to nutrient cycling and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPirellulales
FamilyPirellulaceae
GenusRhodopirellula
SpeciesRhodopirellula baltica
StrainSH28 cSH280182

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopirellula baltica SH28 cSH280182


Gene Summary

Adenine Count

1589939 bp

Thymine Count

1592923 bp

Guanine Count

1985204 bp

Cytosine Count

1981614 bp

Genome Length

7149689 bp

Protein-coding Genes

6122 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein containing duf1568RBSH_00001Not Available+7 - 57922726.0
intracellular protease, pfpi familyRBSH_00002Not Available-612 - 121421506.7
sec-independent protein translocase, tatc subunitRBSH_00003Not Available+1333 - 247542356.1
amp-dependent synthetase and ligaseRBSH_00004Not Available-2498 - 394652464.7
rrna methylaseRBSH_00005Not Available-3933 - 474229534.5
hypothetical proteinRBSH_00006Not Available+4921 - 593436846.6
hypothetical proteinRBSH_00007Not Available+6039 - 811476077.1
hypothetical proteinRBSH_00008Not Available-8137 - 973860222.6
hypothetical proteinRBSH_00009Not Available-9738 - 1014215158.2
hypothetical proteinRBSH_00010Not Available+10385 - 105977827.54

Displaying genes 1 – 10 of 6186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

80 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 80 metabolites