Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium sp. AP12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
955216 bp
Thymine Count
957743 bp
Guanine Count
1850173 bp
Cytosine Count
1848485 bp
Genome Length
5611617 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | PMI02_04890 | Not Available | - | 4977768 - 4979582 | 67394.1 |
| hypothetical protein | PMI02_04891 | Not Available | - | 4979524 - 4979946 | 15170.3 |
| hypothetical protein | PMI02_04892 | Not Available | - | 4980186 - 4980392 | 7323.39 |
| Putative class i holin | PMI02_04893 | Not Available | - | 4980368 - 4980763 | 15039.9 |
| Hypothetical protein | PMI02_04894 | Not Available | - | 4981359 - 4981658 | 10862.6 |
| 16s ribosomal rna | Not Available | Not Available | + | 265 - 1633 | Not Available |
| rnd family efflux transporter, mfp subunit | PMI02_00001 | Not Available | - | 1 - 865 | 29327.9 |
| transcriptional regulator | PMI02_00002 | Not Available | - | 952 - 1575 | 22939.2 |
| hypothetical protein | PMI02_00003 | Not Available | + | 1672 - 2006 | 11561.9 |
| Ncrna_class:other | Not Available | Not Available | + | 1981 - 2058 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.