Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium sp. AP12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
955216 bp
Thymine Count
957743 bp
Guanine Count
1850173 bp
Cytosine Count
1848485 bp
Genome Length
5611617 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Ribonuclease iii | PMI02_02767 | Not Available | - | 3059018 - 3059476 | 16187.2 |
| Putative tail protein | PMI02_02768 | Not Available | - | 3059497 - 3061692 | 77027.5 |
| Hypothetical protein | PMI02_02769 | Not Available | - | 3061702 - 3062109 | 14252.6 |
| Minor tail protein | PMI02_02770 | Not Available | - | 3062106 - 3062930 | 29343.8 |
| Putative capsid and scaffold protein | PMI02_02771 | Not Available | - | 3062927 - 3065260 | 84239.2 |
| Hypothetical protein | PMI02_02772 | Not Available | - | 3065272 - 3065838 | 18937.3 |
| putative phage protein (duf2376) | PMI02_02773 | Not Available | - | 3065828 - 3066025 | 6926.35 |
| protein of unknown function (duf3356) | PMI02_02774 | Not Available | - | 3066022 - 3066333 | 10648.1 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | PMI02_02775 | Not Available | - | 3066330 - 3066737 | 14102.6 |
| Tail protein | PMI02_02776 | Not Available | - | 3066779 - 3067168 | 13946.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.