Parabacteroides merdae CL03T12C32

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, strictly anaerobic bacterium. As a member of the genus Parabacteroides, this microbe is characterized by its inability to grow in the presence of oxygen, indicating a specialized metabolic pathway that relies on anaerobic conditions. This trait is typical of organisms that inhabit environments devoid of oxygen, such as the human gut microbiome, where they may play a role in fermentative processes. The Gram-negative nature of P. merdae CL03T12C32 suggests a complex cell wall structure, typically comprising an inner membrane, a thin peptidoglycan layer, and an outer membrane containing lipopolysaccharides. This structural characteristic may influence its interactions with the host's immune system and its resistance to certain antibiotics. The ecological role of P. merdae CL03T12C32 could be significant in maintaining gut homeostasis and contributing to the breakdown of complex carbohydrates, which can provide essential nutrients for both the bacteria and the host. Furthermore, the strict anaerobic requirement of this bacterium underscores its specialized adaptation to niche environments within the gastrointestinal tract, where it may interact with other microbial species to form complex communities. This cooperative behavior may be critical for the overall metabolic functionality and health of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32


Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHMPREF1060_04032Not Available+4780975 - 478253159867.3
hypothetical proteinHMPREF1060_04033Not Available+4782549 - 478440269943.9
hypothetical proteinHMPREF1060_04034Not Available+4784423 - 478646278516.2
hypothetical proteinHMPREF1060_04035Not Available+4786658 - 4790611151017.0
hypothetical proteinHMPREF1060_04036Not Available-4790642 - 479266076767.7
hypothetical proteinHMPREF1060_04037Not Available-4792822 - 47930528895.38
hypothetical proteinHMPREF1060_04038Not Available-4793055 - 479437749522.5
hypothetical proteinHMPREF1060_04039Not Available-4794374 - 479518029915.7
hypothetical proteinHMPREF1060_04040Not Available+4795633 - 479648432473.8
ribosomal rna small subunit methyltransferase gHMPREF1060_04041Not Available+4796515 - 479718625050.7

Displaying genes 4131 – 4140 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites