Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | CL03T12C32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1343782 bp
Thymine Count
1348772 bp
Guanine Count
1116269 bp
Cytosine Count
1109222 bp
Genome Length
4918045 bp
Protein-coding Genes
4122 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF1060_00388 | Not Available | + | 455108 - 458260 | 115083.0 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | HMPREF1060_00389 | Not Available | + | 458238 - 459683 | 54057.2 |
| hypothetical protein | HMPREF1060_00390 | Not Available | + | 459809 - 461341 | 59141.8 |
| kama family protein | HMPREF1060_00391 | Not Available | + | 461510 - 463621 | 80889.5 |
| hypothetical protein | HMPREF1060_00392 | Not Available | + | 463664 - 464197 | 19209.5 |
| hypothetical protein | HMPREF1060_00393 | Not Available | + | 464201 - 465157 | 37236.3 |
| dna repair protein rada | HMPREF1060_00394 | Not Available | + | 465257 - 466627 | 49949.7 |
| hypothetical protein | HMPREF1060_00395 | Not Available | + | 466640 - 467623 | 37732.0 |
| hypothetical protein | HMPREF1060_00396 | Not Available | + | 467620 - 468330 | 27198.6 |
| hypothetical protein | HMPREF1060_00397 | Not Available | + | 468333 - 469919 | 58324.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

