Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, strictly anaerobic bacterium. As a member of the genus Parabacteroides, this microbe is characterized by its inability to grow in the presence of oxygen, indicating a specialized metabolic pathway that relies on anaerobic conditions. This trait is typical of organisms that inhabit environments devoid of oxygen, such as the human gut microbiome, where they may play a role in fermentative processes. The Gram-negative nature of P. merdae CL03T12C32 suggests a complex cell wall structure, typically comprising an inner membrane, a thin peptidoglycan layer, and an outer membrane containing lipopolysaccharides. This structural characteristic may influence its interactions with the host's immune system and its resistance to certain antibiotics. The ecological role of P. merdae CL03T12C32 could be significant in maintaining gut homeostasis and contributing to the breakdown of complex carbohydrates, which can provide essential nutrients for both the bacteria and the host. Furthermore, the strict anaerobic requirement of this bacterium underscores its specialized adaptation to niche environments within the gastrointestinal tract, where it may interact with other microbial species to form complex communities. This cooperative behavior may be critical for the overall metabolic functionality and health of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32


Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Major capsid proteinHMPREF1060_01658Not AvailableNegative1917383 - 191856142252.4
Prohead proteaseHMPREF1060_01659Not AvailableNegative1918561 - 191910620685.4
hypothetical proteinHMPREF1060_01660Not AvailableNegative1919125 - 191958317091.0
hypothetical proteinHMPREF1060_01661Not AvailableNegative1919571 - 191993313624.1
Portal proteinHMPREF1060_01662Not AvailableNegative1919914 - 192114946019.0
Terminase large subunitHMPREF1060_01663Not AvailableNegative1921161 - 192278360876.6
Terminase small subunitHMPREF1060_01664Not AvailableNegative1922783 - 192316614300.3
hypothetical proteinHMPREF1060_01665Not AvailablePositive1923365 - 19235507179.73
hypothetical proteinHMPREF1060_01666Not AvailablePositive1923528 - 192398317850.4
Hnh endonuclease family proteinHMPREF1060_01667Not AvailablePositive1923937 - 192424512201.8

Displaying genes 11 – 20 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.