Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides caccae |
| Strain | CL03T12C61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1556091 bp
Thymine Count
1576357 bp
Guanine Count
1184702 bp
Cytosine Count
1161969 bp
Genome Length
5479119 bp
Protein-coding Genes
4577 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 2269705 - 2269716 | Not Available |
| Hypothetical protein | HMPREF1061_01971 | Not Available | + | 2275886 - 2279113 | 115296.0 |
| hypothetical protein | HMPREF1061_01972 | Not Available | + | 2279141 - 2279533 | 14620.6 |
| Putative tail fiber assembly protein | HMPREF1061_01973 | Not Available | + | 2279550 - 2280080 | 19984.9 |
| hypothetical protein | HMPREF1061_01974 | Not Available | - | 2280050 - 2280331 | 10603.9 |
| Putative tail fiber assembly protein | HMPREF1061_01975 | Not Available | - | 2280322 - 2280579 | 9880.83 |
| Putative tail fiber protein | HMPREF1061_01976 | Not Available | + | 2281151 - 2285098 | 145517.0 |
| hypothetical protein | HMPREF1061_01977 | Not Available | + | 2285106 - 2285429 | 12172.7 |
| hypothetical protein | HMPREF1061_01978 | Not Available | + | 2285426 - 2285692 | 9576.25 |
| Hypothetical protein | HMPREF1061_01979 | Not Available | + | 2285720 - 2286178 | 17143.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


