Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | HMPREF9720_0704 | Not Available | + | 326937 - 328049 | 39752.9 |
| Attl | Not Available | Not Available | + | 327812 - 327828 | Not Available |
| Fiber protein | HMPREF9720_0705 | Not Available | + | 328096 - 328659 | 20522.1 |
| Putative tail fiber assembly protein | HMPREF9720_0706 | Not Available | + | 328673 - 329005 | 12847.0 |
| Hypothetical protein | HMPREF9720_0707 | Not Available | + | 328969 - 329649 | 25177.4 |
| hypothetical protein | HMPREF9720_0708 | Not Available | + | 329856 - 330410 | 20553.3 |
| Hypothetical protein | HMPREF9720_0709 | Not Available | + | 330435 - 330647 | 7547.3 |
| Peptidoglycan hydrolase | HMPREF9720_0710 | Not Available | + | 330662 - 331162 | 18970.7 |
| Hypothetical protein | HMPREF9720_0711 | Not Available | + | 331159 - 331773 | 23504.8 |
| hypothetical protein | HMPREF9720_0712 | Not Available | - | 332301 - 333017 | 27389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.