Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Dna breaking-rejoining enzyme | HMPREF9720_0713 | Not Available | - | 333082 - 334260 | 46287.7 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | + | 334419 - 334491 | Not Available |
| Cysteine synthase | HMPREF9720_0715 | Not Available | - | 334717 - 335625 | 32862.1 |
| Attr | Not Available | Not Available | + | 337678 - 337694 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 36 - 2841 | Not Available |
| Trna-phe | Not Available | Not Available | + | 52 - 124 | Not Available |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | + | 3017 - 3113 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3079 - 3192 | Not Available |
| bnr/asp-box repeat protein | HMPREF9720_1590 | Not Available | - | 958 - 3171 | 80146.7 |
| hypothetical protein | HMPREF9720_1591 | Not Available | - | 4026 - 4439 | 15951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.