Pseudomonas syringae pv. pisi str. 1704B

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. pisi str. 1704B is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and aerobic metabolism. As a heterotroph, this strain relies on organic compounds as its energy source, enabling it to thrive in diverse habitats where organic material is available. The ability to grow in multiple environments suggests a versatile adaptability, which is a notable trait of the Pseudomonas genus. The aerobic nature of P. syringae pv. pisi str. 1704B indicates that it requires oxygen for its metabolic processes, which may influence its ecological niche and interactions with other microorganisms. This strain exemplifies the ecological significance of Pseudomonas species, which are known to play critical roles in nutrient cycling and plant-microbe interactions. The physiological traits of P. syringae pv. pisi str. 1704B can contribute to its potential applications in biocontrol and bioremediation, highlighting the importance of understanding its metabolic capabilities within various ecological contexts. Overall, the adaptability of this bacterium to different environments underscores the ecological resilience of Pseudomonas species and their potential utility in agricultural and environmental settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. pisi 1704B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. pisi str. 1704B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. pisi str. 1704B


Gene Summary

Adenine Count

1349372 bp

Thymine Count

1344546 bp

Guanine Count

1909357 bp

Cytosine Count

1917311 bp

Genome Length

6520586 bp

Protein-coding Genes

9119 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail proteinPSYPI_06318Not Available-1092861 - 109363926788.2
Putative bacteriophage proteinPSYPI_06323Not Available-1093770 - 109406610616.6
Tail tube proteinPSYPI_06328Not Available-1094063 - 109441012454.8
Tail sheath proteinPSYPI_06333P44233-1094471 - 109596753281.1
hypothetical proteinPSYPI_06338Not Available-1095986 - 10961325459.2
Hypothetical proteinPSYPI_06343Not Available-1096170 - 109676021112.7
LipoproteinPSYPI_06348Not Available-1096807 - 109709710385.3
Portal proteinPSYPI_10150P51717+1728225 - 172910632865.2
Hypothetical proteinPSYPI_10155Not Available+1729182 - 17294429893.96
hypothetical proteinPSYPI_10160Not Available-1729482 - 17296647190.48

Displaying genes 1 – 10 of 9218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

324 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 324 metabolites