Bacteroides sp. 1_1_30

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. 1_1_30 is a Gram-negative bacterium belonging to the diverse genus Bacteroides, which is commonly found in various anaerobic environments, particularly within the gastrointestinal tract of mammals. This microbe exhibits the characteristic features of Gram-negative bacteria, including a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may influence its interactions within microbial communities. As a member of the Bacteroides genus, Bacteroides sp. 1_1_30 is likely to play a significant role in the digestion of complex carbohydrates, contributing to the breakdown of polysaccharides and the fermentation processes essential for nutrient absorption in the host. Moreover, its presence in the gut microbiota underscores its potential involvement in maintaining gut health and homeostasis, as many Bacteroides species are known to participate in the synthesis of essential metabolites and the modulation of immune responses. The unique trait of Bacteroides sp. 1_1_30 as a Gram-negative organism might also suggest specific interactions with other microbial species and host cells, potentially influencing the overall microbial diversity and functionality within its ecological niche. Understanding the precise role of this bacterium within the gut microbiome could provide insights into its contributions to metabolic processes and its potential implications for host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. 1_1_30
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. 1_1_30


Gene Summary

Adenine Count

1828264 bp

Thymine Count

1892280 bp

Guanine Count

1412358 bp

Cytosine Count

1308816 bp

Genome Length

6441725 bp

Protein-coding Genes

5281 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Transcriptional regulatorHMPREF0127_02233Not Available+2830765 - 283131621641.9
hypothetical proteinHMPREF0127_02234Not Available+2831331 - 28315437996.78
hypothetical proteinHMPREF0127_02235Not Available+2831547 - 283183110783.2
3_nc_021789: atpase containing proteinHMPREF0127_02236Not Available+2831833 - 283379473689.9
Gp42HMPREF0127_02237Not Available+2833803 - 283474134972.6
MetallohydrolaseHMPREF0127_02238Not Available+2834748 - 283547627049.7
Hypothetical proteinHMPREF0127_02239Not Available+2835481 - 283591216829.2
hypothetical proteinHMPREF0127_02240Not Available+2836044 - 283667323755.2
1_nc_021804: hypothetical proteinHMPREF0127_02241Not Available+2836717 - 283715116832.9
1_nc_021804: hypothetical proteinHMPREF0127_02242Not Available+2837177 - 283793528305.9

Displaying genes 1 – 10 of 5377 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

467 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da

Displaying 1–10 of 467 metabolites