Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative methyl-accepting chemotaxis protein | VDA_001198 | Not Available | - | 34420 - 36339 | 69780.7 |
| aconitate hydratase 2 | VDA_001199 | Not Available | + | 36740 - 39337 | 93659.2 |
| glycerate kinase | VDA_001200 | Not Available | - | 39448 - 40581 | 38924.0 |
| d-glycerate transporter, predicted | VDA_001201 | Not Available | - | 40592 - 41581 | 33440.1 |
| sugar diacid utilization regulator sdar | VDA_001202 | Not Available | - | 41989 - 43146 | 43730.1 |
| hypothetical protein | VDA_001203 | Not Available | + | 43421 - 43570 | 5872.73 |
| nitrogen regulatory protein p-ii | VDA_001204 | Not Available | + | 43752 - 44090 | 12348.0 |
| ammonium transporter | VDA_001205 | Not Available | + | 44154 - 45383 | 43087.6 |
| ferric iron abc transporter iron-binding protein | VDA_001206 | Not Available | + | 45574 - 46587 | 37682.9 |
| ferric iron abc transporter permease protein | VDA_001207 | Not Available | + | 46743 - 48368 | 60387.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.