Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Repressor protein | VDA_000934 | Not Available | + | 4230915 - 4231631 | 26675.5 |
| hypothetical protein | VDA_000935 | Not Available | + | 4232234 - 4232422 | 7031.23 |
| Putative phage recombination protein | VDA_000936 | Not Available | + | 4232492 - 4233349 | 32316.3 |
| Hypothetical protein | VDA_000937 | Not Available | + | 4233349 - 4234956 | 59927.0 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d- alanyl ligase | VDA_001172 | Not Available | + | 100 - 1482 | 49011.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | VDA_001173 | Not Available | + | 1479 - 2561 | 40230.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | VDA_001174 | Not Available | + | 2565 - 3908 | 47744.1 |
| cell division protein ftsw | VDA_001175 | Not Available | + | 3902 - 5206 | 47915.5 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | VDA_001176 | Not Available | + | 5322 - 6257 | 33116.1 |
| udp-n-acetylmuramate--alanine ligase | VDA_001177 | Not Available | + | 6315 - 7733 | 51132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.