Vibrio cholerae B33

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae B33 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and exhibits facultative anaerobic metabolism. This organism is classified as a heterotroph, meaning it requires organic compounds for energy and growth. It thrives optimally at a temperature of 20.0°C, suggesting a preference for cooler environments, which may influence its distribution and ecological niches. Vibrio cholerae B33 can inhabit diverse habitats, which is indicative of its ecological versatility. This adaptability may allow it to exploit various organic substrates in differing environments, enhancing its survival and proliferation. The ability to grow in both aerobic and anaerobic conditions further supports its ecological resilience, as it can occupy a range of environments where oxygen levels fluctuate. In summary, the combination of its rod shape, facultative anaerobic nature, and heterotrophic lifestyle, alongside its optimal growth temperature, positions Vibrio cholerae B33 as a potentially adaptable organism within various ecological contexts. This adaptability may influence its interactions with other microorganisms and its role in nutrient cycling within the ecosystems it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainB33

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae B33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae B33


Gene Summary

Adenine Count

1090099 bp

Thymine Count

1093212 bp

Guanine Count

974369 bp

Cytosine Count

996976 bp

Genome Length

4154698 bp

Protein-coding Genes

3702 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
RstaVCE_001022Not Available+1099111 - 110019041398.9
RstbVCE_001023Not Available+1100171 - 110055114150.1
CepVCE_001024Not Available+1100687 - 11009358480.75
Hypothetical proteinVCE_001025Not Available+1101042 - 110222943977.1
AceVCE_001026Not Available+1102229 - 110251911347.4
ZotVCE_001027Not Available+1102516 - 110371544905.8
CtxaVCE_001028Not Available+1103814 - 110459029337.2
AttlNot AvailableNot Available+3775891 - 3775902Not Available
Hypothetical proteinVCE_003441Not Available-3779795 - 378142660335.0
Hypothetical proteinVCE_003442Not Available-3781423 - 378189617482.6

Displaying genes 1 – 10 of 3862 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

9 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0007704N-acetyl-L-methionine sulfoneC7H12NO5SChemical structure of N-acetyl-L-methionine sulfoneNot available
Average222.24Da
Monoisotopic222.0441672Da
BASm0007705L-methionine sulfoximineC5H12N2O3SChemical structure of L-methionine sulfoximineNot available
Average180.22Da
Monoisotopic180.0568634Da
BASm0007706N-acetyl-L-methionine sulfoximineC7H13N2O4SChemical structure of N-acetyl-L-methionine sulfoximineNot available
Average221.25Da
Monoisotopic221.060151661Da
BASm0009321beta-D-fructose 1-phosphateC6H11O9PChemical structure of beta-D-fructose 1-phosphateNot available
Average258.12Da
Monoisotopic258.015166092Da

Displaying 1–9 of 9 metabolites