Eikenella corrodens ATCC 23834

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens ATCC 23834 is a Gram-negative, facultative anaerobic bacterium characterized by its ability to thrive in both aerobic and anaerobic environments. This species is part of the normal flora of the human oral cavity and gastrointestinal tract, suggesting its role in maintaining microbial homeostasis within these habitats. The facultative anaerobic nature of E. corrodens allows it to adapt to varying oxygen levels, potentially contributing to its survival and growth in diverse environments, including those encountered during human infections. Eikenella corrodens is typically associated with human bites and certain types of periodontal diseases, indicating its opportunistic nature under specific conditions. Its metabolic versatility may facilitate its survival in the dynamic and often competitive microbial environments of the oral cavity, where it can engage in complex interactions with other microbial species. Interestingly, the presence of Eikenella corrodens in human-associated niches underscores its potential as a marker for the microbial dynamics of the oral and gastrointestinal microbiomes. Its ability to thrive in both oxygen-rich and hypoxic conditions may offer insights into microbial resilience and adaptation strategies in response to environmental stressors, contributing to our understanding of microbial ecology in human health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens ATCC 23834

Accession NumberACEA00000000.1

Gene Summary

Adenine Count

476954 bp

Thymine Count

466557 bp

Guanine Count

586797 bp

Cytosine Count

605047 bp

Genome Length

2135355 bp

Protein-coding Genes

2593 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+119754 - 119767Not Available
Putative tail length tape measure proteinEIKCOROL_00158Not Available+131931 - 13239515827.7
Tail proteinEIKCOROL_00159Not Available+132399 - 13285416308.7
Tail proteinEIKCOROL_00160P21679+132857 - 13407745004.0
Hypothetical proteinEIKCOROL_00161Q57519-134103 - 13534144588.3
Hypothetical proteinEIKCOROL_00162Not Available-135363 - 13566211608.8
hypothetical proteinEIKCOROL_00163Not Available-135669 - 1359389784.75
C repressorEIKCOROL_00164P44207-135966 - 13660122956.5
hypothetical proteinEIKCOROL_00165Not Available+136763 - 1369727322.8
hypothetical proteinEIKCOROL_00166Not Available+137017 - 13752918871.9

Displaying genes 1 – 10 of 2678 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

458 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 458 metabolites