Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thif family protein | BSEG_04265 | O32037 | + | 24579 - 25301 | 27156.2 |
| lipoprotein releasing system, atp-binding protein | BSEG_04264 | Q8A1M1 | + | 25304 - 25963 | 23895.1 |
| hypothetical protein | BSEG_04263 | Not Available | - | 25975 - 26925 | 35041.6 |
| alcohol dehydrogenase 3 | BSEG_04262 | Q46856 | - | 27008 - 28402 | 51545.0 |
| yitl protein | BSEG_04261 | O06747 | + | 28479 - 29312 | 31812.4 |
| hypothetical protein | BSEG_04260 | Not Available | + | 29436 - 30389 | 38433.3 |
| hypothetical protein | BSEG_04531 | Not Available | + | 30440 - 30541 | 3887.35 |
| outer membrane efflux protein | BSEG_04259 | Not Available | - | 30546 - 31862 | 49359.3 |
| efflux transporter, rnd family, mfp subunit | BSEG_04258 | Not Available | - | 31875 - 32969 | 40037.4 |
| efflux abc transporter, permease protein | BSEG_04257 | Not Available | - | 33043 - 34284 | 45564.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

