Escherichia coli str. K-12 substr. W3110

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. K-12 substr. W3110 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is optimized for growth at 37.0°C, which corresponds to the average internal temperature of warm-blooded hosts. As a facultative anaerobe, E. coli K-12 W3110 can thrive in both aerobic and anaerobic environments, allowing it to adapt to varying oxygen levels within its host-associated habitats. This strain is well-established in laboratory settings, serving as a model organism in molecular biology and genetics research. The ability of E. coli K-12 W3110 to utilize different metabolic pathways under varying oxygen conditions reflects its versatility and potential for survival in diverse environments. The adaptation mechanisms of this strain may provide insights into the broader ecological roles of E. coli in host-associated environments, particularly regarding its interactions with the host microbiome and its contributions to nutrient cycling. Notably, the facultative anaerobic nature of E. coli K-12 W3110 suggests that it can play a significant role in fermentative processes within the gastrointestinal tract of its hosts, where it may influence the fermentation of carbohydrates and the production of short-chain fatty acids. This metabolic flexibility underscores its importance in maintaining gut homeostasis and highlights the intricate relationships between microbes and their host environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainK-12 substr. W3110

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. K-12 substr. W3110
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. K-12 substr. W3110


Gene Summary

Adenine Count

1142182 bp

Thymine Count

1143833 bp

Guanine Count

1181238 bp

Cytosine Count

1179079 bp

Genome Length

4646332 bp

Protein-coding Genes

4116 genes

Non-Coding Genes

233 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+563978 - 564024Not Available
IntegraseNONENot Available-564038 - 56520145092.5
Putative exonucleaseNONENot Available-565321 - 56558410509.6
Is3 transposase aNONENot Available+566056 - 56636411913.2
Is3 transposase bNONENot Available+566361 - 56722733542.2
Ren proteinNONENot Available+567285 - 5674707173.82
Putative quaternary ammonium compound-resistance protein qaceNONENot Available+567538 - 56787011959.1
Gp53NONENot Available+568125 - 56965157530.1
predicted kinase inhibitorNONENot Available+570116 - 57066719476.9
predicted dna-binding transcriptional regulatorNONENot Available+570677 - 57147430842.5

Displaying genes 1 – 10 of 4349 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites