Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272168 bp
Thymine Count
1269239 bp
Guanine Count
1294025 bp
Cytosine Count
1289872 bp
Genome Length
5125304 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | C5E18_RS24120 | Not Available | + | 1 - 645 | 23914.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C5E18_RS24125 | Not Available | + | 642 - 1748 | 39823.7 |
| tyrosine-type recombinase/integrase | C5E18_RS24130 | Not Available | + | 2792 - 3916 | 43495.9 |
| dotd/trah family lipoprotein | C5E18_RS24135 | Not Available | + | 4034 - 4495 | 16889.4 |
| type iv secretory system conjugative dna transfer family protein | C5E18_RS24140 | Not Available | + | 4492 - 5286 | 29846.6 |
| plasmid transfer atpase traj | C5E18_RS24145 | Not Available | + | 5283 - 6440 | 43108.9 |
| icmt/trak family protein | C5E18_RS24150 | Not Available | + | 6437 - 6697 | 10448.0 |
| duf5710 domain-containing protein | C5E18_RS24155 | Not Available | + | 6712 - 8004 | 47790.4 |
| hypothetical protein | C5E18_RS24160 | Not Available | + | 7986 - 8606 | 22823.7 |
| hypothetical protein | C5E18_RS25385 | Not Available | + | 8808 - 8945 | 4863.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.