Pseudonocardia sp. HH130629-09

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. HH130629-09
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. HH130629-09

NZ_CP011868.1NZ_CP011869.1

Gene Summary

Adenine Count

35580 bp

Thymine Count

36379 bp

Guanine Count

85097 bp

Cytosine Count

85117 bp

Genome Length

242173 bp

Protein-coding Genes

234 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+640728 - 640744Not Available
IntegraseXF36_RS03065Not Available+647914 - 64914045897.5
CspXF36_RS03070Not Available-649149 - 6493678177.51
transposase family proteinXF36_RS03075Not Available+649548 - 65034529283.5
Is21 transposaseXF36_RS03080Not Available+650469 - 65172846376.5
Transposase/is proteinXF36_RS03085Not Available+651725 - 65257631076.3
AttrNot AvailableNot Available+652722 - 652738Not Available
TransposaseXF36_RS03090Not Available-652775 - 65407047878.3
transposaseXF36_RS29910Not Available+654064 - 65441512786.3
Is30 transposaseXF36_RS03095Not Available-654430 - 65558142890.4

Displaying genes 1 – 10 of 6015 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

11 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00039043-amino-4-hydroxybenzoateC7H6NO3Chemical structure of 3-amino-4-hydroxybenzoateNot available
Average152.13Da
Monoisotopic152.035316637Da
BASm00064185-methyl-1-naphthoateC12H9O2Chemical structure of 5-methyl-1-naphthoateNot available
Average185.203Da
Monoisotopic185.06080311Da
BASm00064193-hydroxy-5-methyl-1-naphthoateC12H9O3Chemical structure of 3-hydroxy-5-methyl-1-naphthoateNot available
Average201.202Da
Monoisotopic201.05571773Da
BASm00067902-hydroxy-5-methyl-1-naphthoateC12H9O3Chemical structure of 2-hydroxy-5-methyl-1-naphthoateNot available
Average201.202Da
Monoisotopic201.05571773Da
BASm0007001UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateNot available
Average875.582Da
Monoisotopic875.1533009Da

Displaying 1–10 of 11 metabolites