Shigella flexneri 4c str. 1205

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri 4c str. 1205 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is characterized as nonsporulating and thrives optimally at a temperature of 37.0°C, which coincides with the typical body temperature of its mammalian hosts. As a chemoorganotroph, S. flexneri 4c str. 1205 derives its energy from organic compounds, which is essential for its survival and growth in host-associated habitats. Furthermore, this bacterium exhibits facultative anaerobic metabolism, allowing it to adapt to varying oxygen levels within the host environment. The combination of these traits suggests that S. flexneri 4c str. 1205 is well-adapted to colonizing the gastrointestinal tract of mammals, where it can exploit the available organic nutrients while being resilient to fluctuating oxygen conditions. This adaptability may contribute to its persistence and potential interactions within the microbiota of its host, highlighting the significance of studying this strain in the context of gut microbiome dynamics and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri 4c str. 1205
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri 4c str. 1205


Gene Summary

Adenine Count

59349 bp

Thymine Count

60879 bp

Guanine Count

52267 bp

Cytosine Count

49565 bp

Genome Length

222060 bp

Protein-coding Genes

270 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type iii secretion system effector phosphothreonine lyaseAD871_RS26585Not Available-9577 - 1029627829.3
omptin family outer membrane protease icspAD871_RS26590Not Available-10421 - 1097720853.1
omptin family outer membrane protease icspAD871_RS29640Not Available+10961 - 112199083.8
hypothetical proteinAD871_RS26595Not Available-11328 - 1190621908.4
omptin family outer membrane protease icspAD871_RS30805Not Available-11955 - 122138481.25
omptin family outer membrane protease icspAD871_RS26605Not Available-12327 - 125648557.08
omptin family outer membrane protease icspAD871_RS26610Not Available-12751 - 1318015646.1
hypothetical proteinAD871_RS30235Not Available-13228 - 134136864.19
omptin family outer membrane protease icspAD871_RS26620Not Available+13576 - 1385710689.2
is4-like element is4 family transposaseAD871_RS26625Not Available-13871 - 1521750914.6

Displaying genes 11 – 20 of 5400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites