Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzae str. DSM 28354
Accession NumberPVTE00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr associated protein cas2 family | CLV58_1491 | Not Available | - | 6371578 - 6371678 | 3993.99 |
| crispr-associated protein cas1 | CLV58_1492 | Not Available | - | 6371714 - 6372799 | 42158.6 |
| crispr-associated exonuclease cas4 | CLV58_1493 | Not Available | - | 6372832 - 6373395 | 21297.8 |
| hypothetical protein | CLV58_1494 | Not Available | - | 6373395 - 6374447 | 39444.6 |
| hypothetical protein | CLV58_1495 | Not Available | - | 6374458 - 6375804 | 50045.1 |
| crispr-associated endonuclease/helicase cas3 | CLV58_1496 | Not Available | - | 6375806 - 6378007 | 82995.5 |
| hypothetical protein | CLV58_1497 | Not Available | - | 6378007 - 6378573 | 21455.7 |
| crispr-associated cas6 family protein | CLV58_1498 | Not Available | - | 6378587 - 6379255 | 24719.1 |
| hypothetical protein | CLV58_1499 | Not Available | + | 6379723 - 6379899 | 6582.82 |
| putative dna-binding transcriptional regulator yafy | CLV58_14910 | Not Available | - | 6379891 - 6380838 | 36547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.