Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzae str. DSM 28354
Accession NumberPVTE00000000.1
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capsule assembly protein wzi | CLV58_14224 | Not Available | - | 6202948 - 6204474 | 55769.6 |
| putative colanic acid biosynthesis udp-glucose lipid carrier transferase | CLV58_14225 | Not Available | - | 6204508 - 6205887 | 53180.2 |
| putative secreted protein (por secretion system target) | CLV58_14226 | Not Available | - | 6206149 - 6206682 | 19647.5 |
| hypothetical protein | CLV58_14227 | Not Available | - | 6206684 - 6208315 | 55332.9 |
| hypothetical protein | CLV58_14228 | Not Available | - | 6208460 - 6209710 | 43541.2 |
| hypothetical protein | CLV58_14229 | Not Available | - | 6209844 - 6211727 | 71778.3 |
| pectate lyase-like protein | CLV58_14230 | Not Available | + | 6211740 - 6213371 | 57626.1 |
| hypothetical protein | CLV58_1431 | Not Available | - | 6214040 - 6214810 | 28101.4 |
| uncharacterized protein duf4281 | CLV58_1432 | Not Available | - | 6214830 - 6215258 | 15981.1 |
| membrane dipeptidase | CLV58_1433 | Not Available | - | 6215383 - 6216579 | 43476.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.