Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzae str. DSM 28354
Accession NumberPVTE00000000.1
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | CLV58_12650 | Not Available | + | 5344766 - 5347987 | 115912.0 |
| putative outer membrane starch-binding protein | CLV58_12651 | Not Available | + | 5348018 - 5349319 | 45975.2 |
| glucose/arabinose dehydrogenase | CLV58_12652 | Not Available | + | 5349580 - 5350800 | 44511.6 |
| putative dehydrogenase | CLV58_12653 | Not Available | - | 5350875 - 5351963 | 39587.9 |
| pin domain-containing protein | CLV58_12654 | Not Available | - | 5351953 - 5352363 | 16328.5 |
| hypothetical protein | CLV58_12655 | Not Available | - | 5352366 - 5352581 | 8383.88 |
| l-iditol 2-dehydrogenase | CLV58_12656 | Not Available | - | 5352651 - 5353682 | 36516.9 |
| 5-methylcytosine-specific restriction protein b | CLV58_12657 | Not Available | - | 5353937 - 5355535 | 60432.9 |
| yd repeat-containing protein | CLV58_12658 | Not Available | + | 5355680 - 5356546 | 31432.0 |
| rnd family efflux transporter mfp subunit | CLV58_12659 | Not Available | - | 5356651 - 5357805 | 41482.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.