Bifidobacterium pseudocatenulatum IPLA36007

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum IPLA36007 is a Gram-positive, anaerobic bacterium belonging to the genus Bifidobacterium, which is commonly found in the gastrointestinal tract of humans and other mammals. This species, like other bifidobacteria, is characterized by its ability to ferment carbohydrates, producing various metabolites that can influence gut health. As an anaerobe, B. pseudocatenulatum IPLA36007 thrives in environments devoid of oxygen, which aligns with its ecological niche in the gut microbiome. The bacterium plays a significant role in the fermentation of dietary fibers and oligosaccharides, contributing to the production of short-chain fatty acids (SCFAs) that are beneficial for gut health and overall metabolism. Research indicates that Bifidobacterium species, including B. pseudocatenulatum, are involved in maintaining gut homeostasis and may have a role in modulating the immune response. While specific traits of B. pseudocatenulatum IPLA36007 regarding its metabolic capabilities or interactions with other gut flora are not detailed, its classification within the bifidobacteria suggests that it could contribute to the overall balance of the intestinal microbiota. In summary, Bifidobacterium pseudocatenulatum IPLA36007 exemplifies the functional diversity of anaerobic, Gram-positive bacteria in the human gut, highlighting its potential significance in digestive health and the microbiome's complex ecosystem. Its presence may enhance the fermentation processes that support not only gut health but also the intricate interplay of microbial communities within the host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
StrainIPLA36007

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum IPLA36007


Gene Summary

Adenine Count

508661 bp

Thymine Count

508849 bp

Guanine Count

652560 bp

Cytosine Count

658108 bp

Genome Length

2328179 bp

Protein-coding Genes

1752 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Prophage antirepressorAW18_08375Not Available+1972763 - 197356329676.5
Helix-turn-helix dna binding proteinAW18_08380Not Available+1973556 - 19737748221.91
hypothetical proteinAW18_08385Not Available+1973771 - 19739506797.3
negative regulator of class i heat shock proteinAW18_08390Not Available+1973947 - 197458523407.9
Endonuclease yqaj superfamilyAW18_08400Not Available+1974737 - 197569936454.1
Dna binding phage related protein rectAW18_08405Not Available+1975702 - 197656832038.0
Ssdna binding proteinAW18_08410Not Available+1976568 - 197705317373.1
Hypothetical proteinAW18_08415Not Available+1977178 - 197756415112.8
hypothetical proteinAW18_08420Not Available+1977567 - 197786311198.2
Hypothetical proteinAW18_08425Not Available+1977860 - 197817111868.3

Displaying genes 1 – 10 of 1830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000841L-arabinono-1,4-lactoneC5H8O5Chemical structure of L-arabinono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.037173358Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002147N-ethylsuccinimideC6H9NO2Chemical structure of N-ethylsuccinimide2314-78-5
Average127.1412Da
Monoisotopic127.0633285Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da

Displaying 1–10 of 19 metabolites