Sphingobium indicum F2

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum F2 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats and exhibits aerobic metabolism. This organism optimally grows at a temperature of 28.0°C, indicating a preference for moderate environmental conditions. As a member of the Sphingobium genus, it is likely to play a role in the degradation of complex organic compounds in its terrestrial ecosystem. The aerobic nature of Sphingobium indicum F2 suggests that it relies on oxygen for its metabolic processes, which may influence its ecological niche, particularly in environments where oxygen is readily available. Its ability to inhabit terrestrial ecosystems positions it as a potential participant in soil microbiomes, where microbial interactions are critical for nutrient cycling and organic matter decomposition. Understanding the traits of Sphingobium indicum F2 not only adds to the knowledge of its biological characteristics but also hints at its potential contributions to soil health and bioremediation efforts. Its metabolic capabilities may allow it to assist in breaking down pollutants or organic materials, thus serving an important function in maintaining ecological balance in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainF2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum F2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum F2


Gene Summary

Adenine Count

790725 bp

Thymine Count

793264 bp

Guanine Count

1421722 bp

Cytosine Count

1437046 bp

Genome Length

4442759 bp

Protein-coding Genes

4079 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ntp pyrophosphohydrolaseAL00_00180Not Available+34877 - 3528414784.2
bacterioferritinAL00_00185Not Available-35335 - 3581418718.4
(2fe-2s)-binding proteinAL00_00190Not Available-35964 - 361346082.56
membrane proteinAL00_00195Not Available-36189 - 3743345787.7
sam-dependent methyltransferaseAL00_00200Not Available+37496 - 3830828741.4
lysr family transcriptional regulatorAL00_00205Not Available-38262 - 3913731677.5
isovaleryl-coa dehydrogenaseAL00_00210Not Available+39224 - 4036941162.6
membrane proteinAL00_00215Not Available-40476 - 4081412291.5
methylcrotonoyl-coa carboxylaseAL00_00220Not Available+40860 - 4246157459.8
hypothetical proteinAL00_00230Not Available-42728 - 429136394.79

Displaying genes 81 – 90 of 4161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites