Clostridium botulinum C/D str. It1

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium botulinum C/D str. It1 is a Gram-positive, rod-shaped bacterium that can be found in diverse habitats, exhibiting a unique cellular arrangement characterized by singles, pairs, and chains. This strain thrives optimally at a temperature of 37.0°C and is classified as a chemoorganotroph, relying on organic compounds for its energy source. As an anaerobic organism, C. botulinum C/D str. It1 requires an environment devoid of oxygen for its growth and metabolism, which is a typical trait of clostridia. The ability to survive and proliferate in various habitats suggests a potential for adaptation to different ecological niches, including soil, sediments, and potentially within the gastrointestinal tracts of certain animals. The diverse arrangement of cells and the strain's anaerobic nature may contribute to its survival strategies in fluctuating environments. This adaptability is crucial for its persistence in ecological systems, where it can exploit organic materials in the absence of oxygen. Understanding the traits of C. botulinum C/D str. It1 not only sheds light on its physiological capabilities but also emphasizes the importance of anaerobic bacteria in nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium botulinum
StrainC/D It1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium botulinum C/D str. It1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles - Chains
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium botulinum C/D str. It1


Gene Summary

Adenine Count

817417 bp

Thymine Count

967238 bp

Guanine Count

294763 bp

Cytosine Count

420288 bp

Genome Length

2499706 bp

Protein-coding Genes

2166 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail proteinZ963_02425Not Available-1302410 - 130311426619.8
Tail tape measure proteinZ963_02430Not Available-1303117 - 130565491017.9
peptide methionine sulfoxide reductaseZ963_02435Not Available-1305667 - 13058949197.05
Hypothetical proteinZ963_02440Not Available-1305960 - 130633714579.0
Putative major tail proteinZ963_02445Not Available-1306388 - 130702023460.9
Putative tail terminator gpuZ963_02450Not Available-1307022 - 130739014764.0
Activator of tail terminatorZ963_02455Not Available-1307390 - 130778814826.9
AttlNot AvailableNot Available+1307420 - 1307431Not Available
Head-tail adapter proteinZ963_02460Not Available-1307781 - 130811012479.6
Hypothetical proteinZ963_02465Not Available-1308110 - 130866421193.5

Displaying genes 1 – 10 of 2436 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

464 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 464 metabolites