Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393

Gram-positiveRodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lacticaseibacillus

Description

Lacticaseibacillus casei DSM 20011 (also known as JCM 1134 and ATCC 393) is a Gram-positive, rod-shaped bacterium that typically forms chains. This organism is classified as a facultative anaerobe, allowing it to thrive in environments with or without oxygen. Lacticaseibacillus casei DSM 20011 exhibits optimal growth at a temperature of 30.0°C, indicating its adaptation to specialized habitats that may be found in fermented foods or specific ecological niches where such temperature conditions are prevalent. The capacity of Lacticaseibacillus casei to grow in both aerobic and anaerobic conditions enhances its versatility and potential utility in various biotechnological applications, particularly in the production of fermented dairy products. Its chain formation may contribute to its functional properties in food matrices, potentially influencing texture and flavor development during fermentation. The specialized habitat of Lacticaseibacillus casei suggests that it may play a role in particular microbial communities where it could interact with other microorganisms, contributing to the stability and diversity of these communities. In summary, Lacticaseibacillus casei DSM 20011 is a versatile and adaptive bacterium with significant implications for food production and microbial ecology, highlighting its importance in the maintenance of specific habitats and interactions within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLacticaseibacillus
SpeciesLacticaseibacillus casei
StrainDSM 20011 = JCM 1134 = ATCC 393

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393


Gene Summary

Adenine Count

753552 bp

Thymine Count

755071 bp

Guanine Count

659214 bp

Cytosine Count

649365 bp

Genome Length

2820682 bp

Protein-coding Genes

2593 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Transcriptional regulatorFC13_GL001087Q47836-1889168 - 188960516787.2
Transcriptional regulatorFC13_GL001088Not Available-1890111 - 18902725749.93
Hypothetical proteinFC13_GL001089Not Available-1890407 - 189084716687.4
AttlNot AvailableNot Available+1890559 - 1890570Not Available
Cytosine-specific methyltransferaseFC13_GL001090Not Available-1890918 - 18911488792.34
Hypothetical proteinFC13_GL001091Not Available-1891145 - 189153114576.0
Mismatch repair proteinFC13_GL001092Not Available-1891552 - 18917316971.04
Hypothetical proteinFC13_GL001093Not Available-1892040 - 189259120899.2
Hypothetical proteinFC13_GL001094Not Available-1892588 - 18928279146.04
Hypothetical proteinFC13_GL001096Not Available-1893202 - 18934569318.41

Displaying genes 1 – 10 of 1008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

59 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 1–10 of 59 metabolites